Package: terraTCGAdata
Type: Package
Title: OpenAccess TCGA Data on Terra as MultiAssayExperiment
Version: 1.17.1
Authors@R: c(
    person("Marcel", "Ramos", , "marcel.ramos@sph.cuny.edu", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-3242-0582")),
    person("NHGRI", role = "fnd",
           comment = c(GrantNo. = "U24HG010263"))
  )
Description: Leverage the existing open access TCGA data on Terra with
        well-established Bioconductor infrastructure. Make use of the
        Terra data model without learning its complexities. With a few
        functions, you can copy / download and generate a
        MultiAssayExperiment from the TCGA example workspaces provided
        by Terra.
Depends: AnVILGCP, MultiAssayExperiment
biocViews: Software, Infrastructure, DataImport
Imports: AnVIL, BiocFileCache, dplyr, GenomicRanges, methods,
        RaggedExperiment, readr, S4Vectors, stats, tidyr, TCGAutils,
        utils
Suggests: AnVILBase, GCPtools, knitr, rmarkdown, BiocStyle, withr,
        testthat (>= 3.0.0)
URL: https://github.com/waldronlab/terraTCGAdata
BugReports: https://github.com/waldronlab/terraTCGAdata/issues
VignetteBuilder: knitr
License: Artistic-2.0
Encoding: UTF-8
RoxygenNote: 7.3.3
Config/testthat/edition: 3
Date: 2025-11-17
Config/pak/sysreqs: cmake make libbz2-dev libicu-dev liblzma-dev
        libpng-dev libsecret-1-dev libuv1-dev libxml2-dev libssl-dev
        libx11-dev xz-utils zlib1g-dev
Repository: https://waldronlab.r-universe.dev
Date/Publication: 2026-04-29 20:52:32 UTC
RemoteUrl: https://github.com/waldronlab/terraTCGAdata
RemoteRef: HEAD
RemoteSha: ffca88ef2d831768bfe494b6c4bdb8aebe925f40
NeedsCompilation: no
Packaged: 2026-07-02 21:11:21 UTC; root
Author: Marcel Ramos [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-3242-0582>),
  NHGRI [fnd] (GrantNo.: U24HG010263)
Maintainer: Marcel Ramos <marcel.ramos@sph.cuny.edu>