Package: bedbaser
Title: A BEDbase client
Version: 1.5.0
Authors@R: c(
    person("Andres", "Wokaty", , "andres.wokaty@sph.cuny.edu", role = c("aut", "cre"),
           comment = c(ORCID = "0009-0008-0900-8793")),
    person("Levi", "Waldron", , "levi.waldron@sph.cuny.edu", role = "aut",
           comment = c(ORCID = "0000-0003-2725-0694")),
    person("NCI", role = "fnd",
           comment = c(GrantNo. = "U24CA289073"))
  )
Description: A client for BEDbase. bedbaser provides access to the API
        at api.bedbase.org. It also includes convenience functions to
        import BED files into GRanges objects and BEDsets into
        GRangesLists.
URL: https://github.com/waldronlab/bedbaser
BugReports: https://github.com/waldronlab/bedbaser/issues
biocViews: Software, DataImport, ThirdPartyClient
License: Artistic License 2.0
Depends: R (>= 4.5.0)
Imports: AnVIL (>= 1.16.0), BiocFileCache, curl, dplyr, GenomeInfoDb,
        GenomicRanges, httr, methods, purrr, rtracklayer, rlang,
        R.utils, stats, stringr, tibble, tidyr, tools, utils
Suggests: BiocStyle, knitr, liftOver, testthat (>= 3.0.0), withr
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: cmake make libbz2-dev libicu-dev liblzma-dev
        libsecret-1-dev libuv1-dev libxml2-dev libssl-dev xz-utils
        zlib1g-dev
Repository: https://waldronlab.r-universe.dev
Date/Publication: 2026-04-28 13:04:27 UTC
RemoteUrl: https://github.com/waldronlab/bedbaser
RemoteRef: HEAD
RemoteSha: c806468975192f60c6ddb3e5e3a6f5e890e3254b
NeedsCompilation: no
Packaged: 2026-06-09 10:21:32 UTC; root
Author: Andres Wokaty [aut, cre] (ORCID:
    <https://orcid.org/0009-0008-0900-8793>),
  Levi Waldron [aut] (ORCID: <https://orcid.org/0000-0003-2725-0694>),
  NCI [fnd] (GrantNo.: U24CA289073)
Maintainer: Andres Wokaty <andres.wokaty@sph.cuny.edu>